Search

 

Sunday, April 29, 2012

Quick DNA Prep-Used for TAIL PCR


  • 1. Excise 4-10 green leaves from mature plant and collect in a 1.5 ml microfuge tube.
  • 2. Macerate tissue with plastic mini pestle.
  • 3. Add 200 µl extraction buffer (200 mM Tris pH 7.5, 250 mM NaCl, 25 mM EDTA pH 8.0, 0.5% SDS).
  • 4. Macerate again until all leaf tissue is ground up.
  • 5. Vortex 5 sec. At this point, samples can sit at room temperature while remaining samples are prepared.
  • 6. Spin samples 3 min at 14K in microfuge.
  • 7. Transfer 150 µl of supernatant to a new tube containing 150 µl isopropanol.
  • 8. Mix samples briefly.
  • 9. Leave at room temperature 2 min.
  • 10. Spin 5 min at 14K in microfuge.
  • 11. Pour off supernatant.
  • 12. Speedvac pellet for 5 min (or until dry).
  • 13. Resuspend pellet vigorously in 200 µl sterile water. Use pipet tip to break up the pellet. Not all of this pellet goes into solution.
  • 14. Spin 1 min at 14K to pellet junk. The pellet material will inhibit the PCR amplification so transfer the supernatant to a new tube after this spin.
  • 15. Use 1µl of this DNA in TAIL PCR reactions.
  • 16. Store DNA at -20°C.

No comments: